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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013116.1_477_2238_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

477 - 2238

Intron Length:

1762

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCGGCATTA

5'SS Class:

weak_major

3'SS Sequence:

GTTAAGTTTGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCACAT

U12 Branch Point Sequence:

GGTAAGTTAAGT

Flanking Amino Acid:

LAAVVFALKIWTKLPKGGKT

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.8

0.04

1.3

48.4

38.9

Major BPS

65.1

0.38

1.1

71.2

35.2

Major PPT

51.4

0.03

1.8

57.9

Minor 5ss

-2.3

4.3

43.2

46.4

Minor BPS

43.8

-0.3

2.4

63.46

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029989

Chromosome:

PEDO01013116.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042223

130 - 2305

2176