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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013128.1_3016_3175_R

Intron Information:

Intron Rank:

133294

Intron Class:

major

Intron Phase:

Intron Coordinates:

3016 - 3175

Intron Length:

160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GGCCTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGAGCAC

U12 Branch Point Sequence:

TGCTGCTGGAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.1

32.7

Major BPS

38.3

-0.7

1.4

37.2

42.1

Major PPT

69.9

0.45

0.9

34.8

Minor 5ss

28.6

-2.4

32.8

35.9

Minor BPS

-0.4

2.2

54.92

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018949

Chromosome:

PEDO01013128.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034272

1800 - 4090

2291