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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013143.1_2941_3392_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2941 - 3392

Intron Length:

452

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGGCCC

5'SS Class:

major

3'SS Sequence:

CTTCTCTCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCACAC

U12 Branch Point Sequence:

GCGCTCACACCA

Flanking Amino Acid:

RIVFFTCRSISGYAYTRPEA

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.3

64.4

38.3

Major BPS

55.5

0.14

64.3

32.4

Major PPT

85.1

0.79

0.7

77.1

31.6

Minor 5ss

27.4

-2.6

34.5

41.3

Minor BPS

38.5

-0.8

1.8

42.22

38.8

Associated Gene:

Gene:

MAF1

Ensembl Gene ID:

ENSAPLG00000009580

Chromosome:

PEDO01013143.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009983

21 - 4942

4922