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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013143.1_811_1734_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

811 - 1734

Intron Length:

924

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GGTGTCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

GTCCCCTCACGC

Flanking Amino Acid:

VETGDAHIIGRIESYSCKMA

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

66.4

0.37

0.9

57.9

38.6

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

43.8

-0.4

52.77

44.6

Associated Gene:

Gene:

MAF1

Ensembl Gene ID:

ENSAPLG00000009580

Chromosome:

PEDO01013143.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009983

21 - 4942

4922