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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013174.1_180_952_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

180 - 952

Intron Length:

773

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTATCCTGC

5'SS Class:

strong_minor

3'SS Sequence:

TCTGTGGTCCCAG|G

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TCCTTAA

U12 Branch Point Sequence:

CTGTCCTTAACT

Flanking Amino Acid:

ELLALRYDLTVPFARYLAMN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

48.2

-0.1

1.2

40.8

Major BPS

69.7

0.49

59.9

38.5

Major PPT

70.1

0.45

60.8

44.7

Minor 5ss

80.5

1.03

1.6

85.3

Minor BPS

86.2

1.22

1.1

91.78

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023996

Chromosome:

PEDO01013174.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043659

93 - 2415

2323