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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013183.1_1603_2130_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1603 - 2130

Intron Length:

528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTTAT

U12 Branch Point Sequence:

GGTGCCTTATCT

Flanking Amino Acid:

VHRITAEEAKYKLCKVRKIF

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

67.9

37.4

Major BPS

61.1

0.28

1.3

53.6

43.8

Major PPT

83.5

0.75

0.9

77.3

Minor 5ss

24.1

-3

3.3

42.8

Minor BPS

63.2

0.49

1.8

77.63

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006829

Chromosome:

PEDO01013183.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007110

21 - 4221

4201