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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013183.1_2303_2653_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2303 - 2653

Intron Length:

351

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTCTC

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCGCCCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

GCTCTTGTCACA

Flanking Amino Acid:

KITDFIKFDTGNLCMVTGGA

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

72.2

39.5

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

58.6

0.19

0.8

49.4

Minor 5ss

31.9

-2.1

3.2

43.3

44.4

Minor BPS

41.8

-0.6

2.2

52.15

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006829

Chromosome:

PEDO01013183.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007110

21 - 4221

4201