Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013210.1_262_357_F

Intron Information:

Intron Rank:

124296

Intron Class:

major

Intron Phase:

Intron Coordinates:

262 - 357

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTCATTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

GCTGCTGTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

33.2

Major BPS

72.5

0.56

1.2

39.9

Major PPT

74.6

0.55

69.1

41.5

Minor 5ss

36.4

-1.5

3.2

49.6

39.8

Minor BPS

42.3

-0.5

2.3

59.22

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017012

Chromosome:

PEDO01013210.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047594

21 - 1141

1121

ENSAPLT00000020845

21 - 1141

1121