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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013215.1_1248_1827_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1248 - 1827

Intron Length:

580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

GACACCCCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTGACAC

U12 Branch Point Sequence:

CACTCGGTGACA

Flanking Amino Acid:

TGPEPQLKLEDMGVLELFRG

Intron Amino Acid Position:

337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

-0.2

1.3

52.4

43.3

Major PPT

59.6

0.22

0.9

50.9

33.6

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

42.9

-0.5

2.6

54.5

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029787

Chromosome:

PEDO01013215.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047913

943 - 4815

3873

ENSAPLT00000042072

943 - 6804

5862