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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013215.1_2199_2774_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2199 - 2774

Intron Length:

576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAGGCT

5'SS Class:

major

3'SS Sequence:

CGTCCCCTCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCCCAA

U12 Branch Point Sequence:

CCAACGACACGT

Flanking Amino Acid:

ENLFNEFLGKVRPKEEEGTM

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

65.5

37.3

Major BPS

46.7

-0.2

1.2

52.4

Major PPT

72.1

0.5

0.8

65.1

30.5

Minor 5ss

29.8

-2.3

3.9

47.1

48.5

Minor BPS

-1.5

2.2

38.08

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029787

Chromosome:

PEDO01013215.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047913

943 - 4815

3873

ENSAPLT00000042072

943 - 6804

5862