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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013215.1_3440_5664_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3440 - 5664

Intron Length:

2225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGACAGCC

5'SS Class:

major

3'SS Sequence:

GGGGACGCTGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCACAC

U12 Branch Point Sequence:

GGGGTCACACCG

Flanking Amino Acid:

AAPQPTLRLEVEATGSGGCG

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

Major BPS

1.2

60.7

37.6

Major PPT

53.6

0.08

1.1

43.3

43.1

Minor 5ss

31.8

-2.1

3.3

42.5

44.5

Minor BPS

35.6

-1.2

1.9

33.43

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029787

Chromosome:

PEDO01013215.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042072

943 - 6804

5862