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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013215.1_4816_5664_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4816 - 5664

Intron Length:

849

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGACAGCC

5'SS Class:

major

3'SS Sequence:

GTGACCGCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTGACAC

U12 Branch Point Sequence:

ACACCGGTGACC

Flanking Amino Acid:

AAPQPTLRLEAANITELPRA

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

Major BPS

-0.2

1.3

52.4

43.3

Major PPT

58.8

0.2

50.6

39.1

Minor 5ss

31.8

-2.1

3.3

42.5

44.5

Minor BPS

40.6

-0.7

2.5

49.91

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029787

Chromosome:

PEDO01013215.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038757

4537 - 6804

2268