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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013259.1_1467_1897_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1467 - 1897

Intron Length:
431

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTAAGTGAG

5'SS Class:
strong_major

3'SS Sequence:
ATGCCTCCGCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCCCAT

U12 Branch Point Sequence:
TGCTGCTGAGTC

Flanking Amino Acid:
AVMFSGVAIMALAFPDQLYD

Intron Amino Acid Position:
40

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87
0.87
0.9
74.1
36.5

Major BPS
59.9
0.25
1.3
70.1
37

Major PPT
62.9
0.29
1
55.2
40.8

Minor 5ss
32.2
-2
3.1
37
41.8

Minor BPS
45.2
-0.3
2
55.76
42.9

Associated Gene:

Gene:
TP53I11

Ensembl Gene ID:

Chromosome:
PEDO01013259.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

52 - 3496
3445

493 - 3633
3141