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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013259.1_2130_3308_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
2130 - 3308

Intron Length:
1179

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTT|GTAAAGCTC

5'SS Class:
major

3'SS Sequence:
CTGTGCTGCTCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CAGAAAA

U12 Branch Point Sequence:
GGCAGCAGAAAA

Flanking Amino Acid:
LLEFFFLWVSYLFVSRHQPL

Intron Amino Acid Position:
117

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
60.2
0.24
1.1
55.9
41.2

Major BPS
45.2
-0.3
1.1
46.6
33

Major PPT
67.5
0.39
1
65
41.2

Minor 5ss
37.2
-1.4
3.6
56.2
42.7

Minor BPS
36.9
-1
1.9
41.31
38.1

Associated Gene:

Gene:
TP53I11

Ensembl Gene ID:

Chromosome:
PEDO01013259.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

52 - 3496
3445