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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013259.1_941_1417_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
941 - 1417

Intron Length:
477

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGACAT

5'SS Class:
strong_major

3'SS Sequence:
CCCTCCTGTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTCAC

U12 Branch Point Sequence:
CCGTGCTCACTC

Flanking Amino Acid:
KFAVREPLGLRVWQLVSAVM

Intron Amino Acid Position:
23

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
91.1
0.97
0.8
80.7
33.7

Major BPS
69.8
0.49
1.1
71.3
36.7

Major PPT
73.3
0.52
0.9
67.9
32.1

Minor 5ss
33.6
-1.9
3.2
47.4
48

Minor BPS
41.2
-0.6
2.1
45.3
44.2

Associated Gene:

Gene:
TP53I11

Ensembl Gene ID:

Chromosome:
PEDO01013259.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

52 - 3496
3445

493 - 3633
3141