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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013270.1_4954_5681_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4954 - 5681

Intron Length:

728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTTTGTGTT

5'SS Class:

weak_major

3'SS Sequence:

TCTCAGGTTTGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

CGTTTCTCAGGT

Flanking Amino Acid:

TPPWDARTHAPGAA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.1

0.19

1.2

63.7

40.7

Major BPS

0.52

1.5

79.6

35.6

Major PPT

51.1

0.03

1.7

44.4

Minor 5ss

42.3

-0.8

3.1

55.7

42.7

Minor BPS

46.1

-0.2

64.31

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031132

Chromosome:

PEDO01013270.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020145

4455 - 5695

1241