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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013281.1_100669_102775_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

100669 - 102775

Intron Length:

2107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTACTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCTAC

U12 Branch Point Sequence:

CTTTTCCTACTC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

71.4

40.3

Major BPS

58.9

0.22

1.3

58.4

Major PPT

82.3

0.73

0.8

81.6

29.1

Minor 5ss

35.1

-1.7

3.1

48.4

47.3

Minor BPS

49.8

-0

1.9

65.95

40.4

Associated Gene:

Gene:

SPATS2

Ensembl Gene ID:

ENSAPLG00000008110

Chromosome:

PEDO01013281.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008439

80338 - 102861

22524