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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013281.1_1133_1393_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
1133 - 1393

Intron Length:
261

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCT|GTGAGTGCC

5'SS Class:
major

3'SS Sequence:
CTCCCCCCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GAATAAC

U12 Branch Point Sequence:
CGCAGAATAACC

Flanking Amino Acid:
RKFLSISPVVLYLLTSFYTK

Intron Amino Acid Position:
109

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.5
0.46
1.1
62.6
36.1

Major BPS
52.4
0.06
1.2
56
37.3

Major PPT
70.7
0.47
0.7
61.5
29

Minor 5ss
31.4
-2.1
3.2
45.9
42.3

Minor BPS
39.4
-0.8
2.1
45.92
42.3

Associated Gene:

Gene:
ORMDL2

Ensembl Gene ID:

Chromosome:
PEDO01013281.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

997 - 2408
1412