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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013281.1_27897_140370_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27897 - 140370

Intron Length:

112474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAATCC

5'SS Class:

strong_major

3'SS Sequence:

GAACATAAGAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATGTCAA

U12 Branch Point Sequence:

AATCCCCCAAAT

Flanking Amino Acid:

AGAGATEDTEEGASSAAAQL

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

71.9

32.2

Major BPS

66.8

0.42

1.1

69.4

37.7

Major PPT

40.1

-0.5

1.7

32.3

39.6

Minor 5ss

38.6

-1.3

3.1

51.6

45.1

Minor BPS

47.7

-0.1

1.9

68.53

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007746

Chromosome:

PEDO01013281.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025606

3116 - 141609

138494