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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013281.1_39784_41448_R


Intron Information:

Intron Rank:
1

Intron Class:
major-like

Intron Phase:
1

Intron Coordinates:
39784 - 41448

Intron Length:
1665

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTGTCCCGG

5'SS Class:
weak_major

3'SS Sequence:
CTTCCTCCCGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCTGAC

U12 Branch Point Sequence:
CGCCCCTGACCC

Flanking Amino Acid:
PPGTYSAVTADPVVQIEGN

Intron Amino Acid Position:
10

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
50.1
0
1.2
34.5
43.1

Major BPS
56.5
0.16
1.1
48.6
36.6

Major PPT
78.4
0.64
0.7
73.1
25.1

Minor 5ss
43.9
-0.7
2.9
55.9
48.4

Minor BPS
47.1
-0.2
1.8
53.35
43.9

Associated Gene:

Gene:
GDF11

Ensembl Gene ID:

Chromosome:
PEDO01013281.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

38353 - 41476
3124