Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013281.1_39784_44032_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

39784 - 44032

Intron Length:

4249

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTCAGTGCC

5'SS Class:

major

3'SS Sequence:

CTTCCTCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CGCCCCTGACCC

Flanking Amino Acid:

TETVISMAQETDPVVQIEGN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.3

70.6

34.9

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

78.4

0.64

0.7

73.1

25.1

Minor 5ss

31.1

-2.2

37.2

33.3

Minor BPS

47.1

-0.2

1.8

53.35

43.9

Associated Gene:

Gene:

GDF11

Ensembl Gene ID:

ENSAPLG00000015433

Chromosome:

PEDO01013281.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038586

38353 - 44240

5888