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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013281.1_5205_6715_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5205 - 6715

Intron Length:

1511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTAACTATC

5'SS Class:

weak_major

3'SS Sequence:

CCCACACCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TTCTCCCCACAC

Flanking Amino Acid:

VEEPPVKPPDVNTEKKVVKI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.3

0.31

1.3

69.1

41.9

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

61.5

0.26

0.8

32.9

Minor 5ss

47.8

-0.2

2.6

64.2

40.2

Minor BPS

44.5

-0.4

2.2

60.69

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007746

Chromosome:

PEDO01013281.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025606

3116 - 141609

138494