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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013281.1_83810_89161_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83810 - 89161

Intron Length:

5352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TGGTACTAAATC

Flanking Amino Acid:

MKQVFAELQSSLMDREVALL

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.9

1.13

0.6

92.3

16.1

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

84.1

0.77

0.8

77.2

37.1

Minor 5ss

-1.7

2.7

41.8

44.8

Minor BPS

52.9

0.07

1.9

63.89

41.9

Associated Gene:

Gene:

SPATS2

Ensembl Gene ID:

ENSAPLG00000008110

Chromosome:

PEDO01013281.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008439

80338 - 102861

22524