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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013320.1_220_1441_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

220 - 1441

Intron Length:

1222

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CGT|GCGGGTTTC

5'SS Class:

weak_major

3'SS Sequence:

CGCCTGGAGGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTGGAG

U12 Branch Point Sequence:

GCCGCCTGGAGG

Flanking Amino Acid:

GPGAGAGPGRRIQWENNGQV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.9

0.07

1.4

61.5

40.1

Major BPS

39.2

-0.6

1.6

34.4

42.4

Major PPT

50.9

0.02

1.1

45.5

40.6

Minor 5ss

29.6

-2.3

4.2

43.2

44.5

Minor BPS

42.2

-0.7

1.9

39.37

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028343

Chromosome:

PEDO01013320.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022103

71 - 1573

1503