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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013327.1_3061_4018_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3061 - 4018

Intron Length:

958

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAA|GCACCGTGG

5'SS Class:

weak_major

3'SS Sequence:

GGTGCCCGAGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCGCAT

U12 Branch Point Sequence:

GGTGCCCGAGCA

Flanking Amino Acid:

VWWLLLQGIKHAAGAASPSS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.4

0.18

1.3

44.6

43.4

Major BPS

48.4

-0.1

1.4

57.1

41.8

Major PPT

54.5

0.1

1.1

40.4

Minor 5ss

-2.1

4.4

45.9

47.4

Minor BPS

43.2

-0.5

55.11

42.9

Associated Gene:

Gene:

BRINP2

Ensembl Gene ID:

ENSAPLG00000019011

Chromosome:

PEDO01013327.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046847

3031 - 8993

5963