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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013327.1_5785_5936_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5785 - 5936

Intron Length:

152

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCTGG

5'SS Class:

strong_major

3'SS Sequence:

CGTGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGAGCAT

U12 Branch Point Sequence:

CCCCCCAGAGCA

Flanking Amino Acid:

THFLLAATLGGEESLTIFVD

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.8

42.7

Major BPS

45.8

-0.2

1.4

51.5

43.9

Major PPT

69.3

0.43

0.9

62.1

34.8

Minor 5ss

37.8

-1.4

46.8

48.5

Minor BPS

41.4

-0.6

1.9

46.55

42.8

Associated Gene:

Gene:

BRINP2

Ensembl Gene ID:

ENSAPLG00000019011

Chromosome:

PEDO01013327.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046847

3031 - 8993

5963