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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013327.1_7891_8137_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7891 - 8137

Intron Length:

247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCTGC

5'SS Class:

major

3'SS Sequence:

CCTTCTCCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAGCAC

U12 Branch Point Sequence:

CCCCCCTAAGCA

Flanking Amino Acid:

RQPRFKLPKERSLPYWWSRA

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

64.1

43.4

Major BPS

48.2

-0.1

1.4

57.7

Major PPT

77.7

0.62

0.7

69.8

31.1

Minor 5ss

42.8

-0.8

3.2

58.8

46.1

Minor BPS

-0.3

1.9

52.03

Associated Gene:

Gene:

BRINP2

Ensembl Gene ID:

ENSAPLG00000019011

Chromosome:

PEDO01013327.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046847

3031 - 8993

5963