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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013333.1_1557_1810_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1557 - 1810

Intron Length:
254

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACCTGGT

5'SS Class:
major

3'SS Sequence:
CCCCTCCCAGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TAGGCAG

U12 Branch Point Sequence:
CCCCTCCCAGCA

Flanking Amino Acid:
ATEVYALAESGSALGQKVAA

Intron Amino Acid Position:
306

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.4
0.53
1.2
67.3
44.3

Major BPS
41.4
-0.5
1.7
49.1
46.3

Major PPT
67.3
0.39
0.8
62.2
27

Minor 5ss
38.9
-1.3
3.5
58.8
45.7

Minor BPS
37.9
-0.9
1.8
40.95
39.7

Associated Gene:

Gene:
FLAD1

Ensembl Gene ID:

Chromosome:
PEDO01013333.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

473 - 3227
2755