Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013333.1_2989_3091_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2989 - 3091

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CGTCCCTCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAT

U12 Branch Point Sequence:

TGCTCCTGGAGC

Flanking Amino Acid:

FVPYCILYDKGYTSLGSMAN

Intron Amino Acid Position:

476

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

74.9

35.3

Major BPS

64.6

0.36

1.3

67.6

40.6

Major PPT

76.2

0.59

0.8

69.3

31.3

Minor 5ss

29.4

-2.4

3.1

33.3

41.7

Minor BPS

51.6

0.03

1.9

63.25

42.5

Associated Gene:

Gene:

FLAD1

Ensembl Gene ID:

ENSAPLG00000023792

Chromosome:

PEDO01013333.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022898

473 - 3227

2755