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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013333.1_5540_5819_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5540 - 5819

Intron Length:

280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACC|GTGAGTCAG

5'SS Class:

major

3'SS Sequence:

CCCTGTCCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTGAC

U12 Branch Point Sequence:

TGTCCCTGTCCT

Flanking Amino Acid:

RLLAPSSAAHPRRCCPMFRS

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.3

0.31

1.3

56.2

44.5

Major BPS

48.3

-0.1

1.3

40.8

41.4

Major PPT

74.6

0.55

0.8

64.9

36.4

Minor 5ss

-2.3

2.8

36.8

40.5

Minor BPS

39.8

-0.7

3.6

71.66

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020208

Chromosome:

PEDO01013333.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021201

4139 - 7418

3280