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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013355.1_2059_2107_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2059 - 2107

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGCAGGGA

5'SS Class:

weak_major

3'SS Sequence:

CGCCTGCGGTGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAGCCAC

U12 Branch Point Sequence:

AGTACCGCAGCC

Flanking Amino Acid:

SAFAPEELPRRGRGGHRGGG

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.4

0.13

1.1

44.5

39.3

Major BPS

42.9

-0.4

1.2

45.5

37.5

Major PPT

43.3

-0.3

1.7

45.4

41.4

Minor 5ss

-3.3

3.4

19.9

37.8

Minor BPS

41.9

-0.6

2.3

55.08

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022266

Chromosome:

PEDO01013355.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026857

802 - 2581

1780