Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013425.1_144_225_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

144 - 225

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGGGTGTG

5'SS Class:

major

3'SS Sequence:

GCCCCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAC

U12 Branch Point Sequence:

CCCCCCCCAATC

Flanking Amino Acid:

KVTKEDDGPKGIDEASESSE

Intron Amino Acid Position:

353

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

63.1

43.4

Major BPS

71.3

0.53

1.2

63.1

44.5

Major PPT

66.8

0.38

0.8

57.1

33.4

Minor 5ss

-2.4

3.4

30.8

43.2

Minor BPS

44.2

-0.4

1.8

48.37

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030472

Chromosome:

PEDO01013425.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048244

21 - 1898

1878