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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013434.1_1260_1531_F

Intron Information:

Intron Rank:

140790

Intron Class:

major

Intron Phase:

Intron Coordinates:

1260 - 1531

Intron Length:

272

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTTC

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGACAA

U12 Branch Point Sequence:

TTGTCAGTACGA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

84.2

27.6

Major BPS

58.4

0.21

1.2

39.8

Major PPT

86.6

0.82

0.8

80.9

Minor 5ss

44.8

-0.6

2.8

61.7

43.1

Minor BPS

41.5

-0.6

2.5

59.8

46.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025791

Chromosome:

PEDO01013434.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041889

464 - 3054

2591

ENSAPLT00000040477

984 - 3054

2071

ENSAPLT00000031253

21 - 3054

3034