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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013446.1_2683_3683_F

Intron Information:

Intron Rank:

138455

Intron Class:

major

Intron Phase:

Intron Coordinates:

2683 - 3683

Intron Length:

1001

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTCAG

5'SS Class:

major

3'SS Sequence:

GTTATTTCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAC

U12 Branch Point Sequence:

CTTCCCACAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.5

1.2

60.9

45.3

Major BPS

82.3

0.8

83.6

25.8

Major PPT

82.3

0.73

0.9

73.7

41.6

Minor 5ss

28.5

-2.5

2.9

32.1

42.4

Minor BPS

57.2

0.3

1.9

79.18

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024543

Chromosome:

PEDO01013446.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020941

1452 - 5172

3721