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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013461.1_845_1027_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
845 - 1027

Intron Length:
183

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACA|GTGAGTGGT

5'SS Class:
major

3'SS Sequence:
CTTCTCGCTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTTCAG

U12 Branch Point Sequence:
TGTGTTTCAGCT

Flanking Amino Acid:
IDERGPITTKQFAAIHAEAP

Intron Amino Acid Position:
132

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72
0.52
1
66.3
39.5

Major BPS
58.3
0.21
1.7
71.4
45.1

Major PPT
79.1
0.66
0.8
73.1
31.8

Minor 5ss
31.2
-2.2
3.3
45.7
43.5

Minor BPS
47.9
-0
1.8
68.21
43

Associated Gene:

Gene:
ATP5F1B

Ensembl Gene ID:

Chromosome:
PEDO01013461.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

59 - 2996
2938