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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013463.1_5066_5159_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5066 - 5159

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCCATGATG

5'SS Class:

weak_major

3'SS Sequence:

TGCCGGGGTGGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTCAG

U12 Branch Point Sequence:

CCCTCCTCAGGG

Flanking Amino Acid:

FHPADTQQGMKGTHCAHIAF

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.4

0.22

1.3

61.6

42.9

Major BPS

58.4

0.21

1.5

67.6

40.6

Major PPT

44.1

-0.3

1.7

41.4

Minor 5ss

21.2

-3.3

3.8

28.4

37.1

Minor BPS

42.6

-0.7

2.1

42.75

48.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027136

Chromosome:

PEDO01013463.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039192

3431 - 6777

3347