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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013469.1_1553_2180_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1553 - 2180

Intron Length:

628

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GCTCTTCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATCAA

U12 Branch Point Sequence:

CCCTCCCCAATC

Flanking Amino Acid:

NEATVTLEVSATGADPHLSL

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

1.1

71.7

38.6

Major BPS

58.9

0.22

1.1

61.7

34.2

Major PPT

74.2

0.55

0.8

65.5

36.1

Minor 5ss

29.4

-2.4

2.9

40.7

Minor BPS

47.3

-0.2

1.9

54.71

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024530

Chromosome:

PEDO01013469.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043937

21 - 4023

4003