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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013475.1_1392_1497_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
1392 - 1497

Intron Length:
106

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCT|GTGAGTGCC

5'SS Class:
major

3'SS Sequence:
GTCCATCCCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATCCCAT

U12 Branch Point Sequence:
GCTCCGTCCATC

Flanking Amino Acid:
FEEKQNLRFDLYDVDSKSPD

Intron Amino Acid Position:
99

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.5
0.46
1.1
62.6
36.1

Major BPS
63.5
0.33
1.2
72.5
34.6

Major PPT
68.5
0.42
0.9
61
34.9

Minor 5ss
31.4
-2.1
3.2
45.9
42.3

Minor BPS
39.2
-0.8
2.4
48.42
41.8

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01013475.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

92 - 2589
2498