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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013503.1_2742_4240_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2742 - 4240

Intron Length:

1499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAA

U12 Branch Point Sequence:

TCTTGTTGAACA

Flanking Amino Acid:

CPDTKKARDACIIEKGEENC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.1

32.7

Major BPS

0.55

1.1

63.4

44.3

Major PPT

92.6

0.96

0.7

88.3

28.9

Minor 5ss

28.6

-2.4

32.8

35.9

Minor BPS

58.2

0.25

1.9

71.68

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030204

Chromosome:

PEDO01013503.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042518

2419 - 4480

2062

ENSAPLT00000026107

2093 - 4480

2388