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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013538.1_4042_4172_R

Intron Information:

Intron Rank:

151430

Intron Class:

major

Intron Phase:

Intron Coordinates:

4042 - 4172

Intron Length:

131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTGAT

5'SS Class:

major

3'SS Sequence:

TTGTCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

ATTATCTTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.2

73.5

37.5

Major BPS

76.9

0.67

66.3

40.4

Major PPT

87.1

0.83

0.7

85.1

29.7

Minor 5ss

29.3

-2.4

3.3

40.4

45.9

Minor BPS

1.05

1.1

91.05

31.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029028

Chromosome:

PEDO01013538.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032919

2549 - 4325

1777