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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013590.1_1786_1971_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1786 - 1971

Intron Length:

186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGTGGG

5'SS Class:

major

3'SS Sequence:

GGAGAAGATGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCACAT

U12 Branch Point Sequence:

CTGGCCCCACAT

Flanking Amino Acid:

MVHPNDIVFDAPALHLHPR

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

59.8

45.2

Major BPS

52.8

0.07

1.1

60.5

36.2

Major PPT

44.2

-0.3

1.2

31.2

Minor 5ss

30.8

-2.2

3.4

36.8

42.9

Minor BPS

38.6

-0.7

2.1

53.78

47.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018518

Chromosome:

PEDO01013590.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025111

65 - 1997

1933