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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013591.1_18035_18113_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
18035 - 18113

Intron Length:
79

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTGAGATGC

5'SS Class:
major

3'SS Sequence:
GTTCTCCTGCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCTGAC

U12 Branch Point Sequence:
GTGTCCTGACCC

Flanking Amino Acid:
VQVADIVVPRGGENFVALDL

Intron Amino Acid Position:
185

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.2
0.62
1
62.9
38.7

Major BPS
68.9
0.47
1
59.2
39.1

Major PPT
72.9
0.52
1
65.9
40.9

Minor 5ss
32.4
-2
3
33.5
42

Minor BPS
57.6
0.22
1.8
68.13
43.1

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01013591.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

15169 - 24416
9248

15169 - 25438
10270