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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013591.1_32738_32939_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
32738 - 32939

Intron Length:
202

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTATGGTTT

5'SS Class:
major

3'SS Sequence:
CCTCTCCCCGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CGCCGAT

U12 Branch Point Sequence:
GATCCCGCAGCG

Flanking Amino Acid:
QTDSFVSNELDDPDDLIVLR

Intron Amino Acid Position:
439

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.1
0.59
1
72.1
39.9

Major BPS
46.5
-0.2
1.3
41.5
41.3

Major PPT
75
0.56
0.7
69
24.7

Minor 5ss
48.3
-0.1
3.1
64.2
47.3

Minor BPS
40.6
-0.8
2.3
47.68
44.7

Associated Gene:

Gene:
EIF2B4

Ensembl Gene ID:

Chromosome:
PEDO01013591.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

32535 - 39573
7039

32535 - 39606
7072