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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013591.1_33400_35196_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
33400 - 35196

Intron Length:
1797

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTAAGAAGG

5'SS Class:
strong_major

3'SS Sequence:
CAGTGTCTGCCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCTTGAC

U12 Branch Point Sequence:
AGCCCCTTGACC

Flanking Amino Acid:
NDRDVILVYGCSSLVNRTLC

Intron Amino Acid Position:
318

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82
0.76
0.9
68.2
42.8

Major BPS
61.6
0.29
1.1
54.6
40.8

Major PPT
62.3
0.28
1.1
54.1
45.5

Minor 5ss
33
-1.9
2.9
37.5
41.1

Minor BPS
66
0.49
1.3
66.7
38.7

Associated Gene:

Gene:
EIF2B4

Ensembl Gene ID:

Chromosome:
PEDO01013591.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

32535 - 39606
7072

32535 - 39573
7039