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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013591.1_3596_3773_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3596 - 3773

Intron Length:

178

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGACCC

5'SS Class:

major

3'SS Sequence:

TTCTCCTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCACAC

U12 Branch Point Sequence:

TTCTCCTGCACA

Flanking Amino Acid:

PRQKPASSPHGQH*

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

61.3

37.5

Major BPS

55.2

0.13

1.1

62.9

34.3

Major PPT

76.2

0.59

0.9

71.7

32.8

Minor 5ss

27.9

-2.5

2.9

32.1

35.6

Minor BPS

61.9

0.37

76.11

41.2

Associated Gene:

Gene:

TRIM54

Ensembl Gene ID:

ENSAPLG00000030363

Chromosome:

PEDO01013591.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018907

2585 - 5582

2998