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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013591.1_38644_38861_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
38644 - 38861

Intron Length:
218

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAACGATG

5'SS Class:
major

3'SS Sequence:
ATCGTTCTCACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTCAT

U12 Branch Point Sequence:
TACTGCTTCACG

Flanking Amino Acid:
PRLTPTEPPTVVKRLPEHVQ

Intron Amino Acid Position:
119

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.6
0.65
1.2
73.4
43.3

Major BPS
87.4
0.93
0.9
87.9
29.5

Major PPT
75
0.56
0.9
68.6
36.8

Minor 5ss
41.4
-1
3.2
56.9
47.4

Minor BPS
49.4
-0.1
2.3
60.03
47.5

Associated Gene:

Gene:
EIF2B4

Ensembl Gene ID:

Chromosome:
PEDO01013591.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

32535 - 39606
7072

32535 - 39573
7039