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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013591.1_4548_4661_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4548 - 4661

Intron Length:

114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

GTCTGCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGGGCAT

U12 Branch Point Sequence:

AGCTCCCGAGGG

Flanking Amino Acid:

YLQHSKELLKKITDMSKVSM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

69.9

41.1

Major BPS

44.4

-0.3

1.5

48.8

46.3

Major PPT

73.7

0.53

0.9

66.1

35.9

Minor 5ss

33.8

-1.8

3.2

40.5

39.9

Minor BPS

-1

2.1

40.35

43.1

Associated Gene:

Gene:

TRIM54

Ensembl Gene ID:

ENSAPLG00000030363

Chromosome:

PEDO01013591.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018907

2585 - 5582

2998