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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013604.1_2288_2357_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2288 - 2357

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCGCGGCGC

5'SS Class:

major

3'SS Sequence:

CCGGGGGGCTCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGGGGT

U12 Branch Point Sequence:

GGGGCTGTGGCT

Flanking Amino Acid:

DAWPDFGAVLRCPAPQAPVD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.1

0.36

1.2

54.4

39.3

Major BPS

22.3

-1.7

4.1

42.8

49.4

Major PPT

48.7

-0

1.1

41.1

Minor 5ss

14.4

-4.1

3.6

20.6

31.6

Minor BPS

31.4

-1.3

3.5

51.47

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017200

Chromosome:

PEDO01013604.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025605

1689 - 3424

1736