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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013604.1_2306_2375_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2306 - 2375

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGCTGCC

5'SS Class:

major

3'SS Sequence:

CCCTGCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAG

U12 Branch Point Sequence:

CCTGCCCCACAG

Flanking Amino Acid:

GAVLARRSGEAPVDDSYWNL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.3

0.41

1.2

62.1

38.4

Major BPS

45.3

-0.3

1.7

51.1

46.3

Major PPT

0.41

0.8

60.3

29.7

Minor 5ss

32.7

-2

3.4

44.1

43.8

Minor BPS

35.9

-1.2

2.1

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017200

Chromosome:

PEDO01013604.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021376

1717 - 3424

1708