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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01013604.1_2497_2789_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2497 - 2789

Intron Length:

293

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGGCTCCA

5'SS Class:

weak_major

3'SS Sequence:

TGCCACCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGGGAC

U12 Branch Point Sequence:

GCCGCTGCCACC

Flanking Amino Acid:

LRWDAAFHIFGLQDGVATVS

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.7

0.21

1.2

51.2

41.5

Major BPS

45.5

-0.2

1.4

40.8

41.4

Major PPT

64.9

0.34

0.9

54.5

36.2

Minor 5ss

33.3

-1.9

3.1

38.7

41.6

Minor BPS

34.5

-1.2

2.3

37.91

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017200

Chromosome:

PEDO01013604.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021376

1717 - 3424

1708